IL_9G8M_150

3D structure

PDB id

9G8M (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome bound by a SKI2-exosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

9G8M|1|L5|G|5039

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9G8M|1|L5|U|5001
9G8M|1|L5|C|5002
9G8M|1|L5|G|5003
9G8M|1|L5|U|5004
9G8M|1|L5|A|5005
9G8M|1|L5|C|5006
9G8M|1|L5|G|5007
*
9G8M|1|L5|U|5037
9G8M|1|L5|U|5038
9G8M|1|L5|G|5039
9G8M|1|L5|A|5040
9G8M|1|L5|A|5041
9G8M|1|L5|A|5042

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LW

60S ribosomal protein L24

Chain Ld

60S ribosomal protein L31