IL_9GFT_010
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGCC*GAUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_010 not in the Motif Atlas
- Homologous match to IL_4LFB_008
- Geometric discrepancy: 0.1238
- The information below is about IL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_64231.5
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
9GFT|1|0|C|132
9GFT|1|0|U|133
9GFT|1|0|G|134
9GFT|1|0|C|135
9GFT|1|0|C|136
*
9GFT|1|0|G|227
9GFT|1|0|A|228
9GFT|1|0|U|229
9GFT|1|0|G|230
Current chains
- Chain 0
- 16S ribosomal RNA
Nearby chains
- Chain I
- Small ribosomal subunit protein bS16
- Chain u
- Small ribosomal subunit protein bS20
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