IL_9GFT_018
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACAAU*AU
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_018 not in the Motif Atlas
- Homologous match to IL_6CZR_127
- Geometric discrepancy: 0.1817
- The information below is about IL_6CZR_127
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_03109.2
- Basepair signature
- cWW-cSH-cWS-tWH-cWW
- Number of instances in this motif group
- 5
Unit IDs
9GFT|1|0|A|371
9GFT|1|0|C|372
9GFT|1|0|A|373
9GFT|1|0|A|374
9GFT|1|0|U|375
*
9GFT|1|0|A|389
9GFT|1|0|U|390
Current chains
- Chain 0
- 16S ribosomal RNA
Nearby chains
- Chain I
- Small ribosomal subunit protein bS16
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