IL_9GFT_046
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 9GFT|1|0|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_046 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.1694
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
9GFT|1|0|U|1052
9GFT|1|0|G|1053
9GFT|1|0|C|1054
9GFT|1|0|A|1055
9GFT|1|0|U|1056
*
9GFT|1|0|A|1204
9GFT|1|0|U|1205
9GFT|1|0|G|1206
Current chains
- Chain 0
- 16S ribosomal RNA
Nearby chains
- Chain 2
- Small ribosomal subunit protein uS3
- Chain 9
- Small ribosomal subunit protein uS10
- Chain A
- Transfer RNA; tRNA
- Chain G
- Small ribosomal subunit protein uS14
- Chain w
- messenger RNA
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