IL_9GFT_144

3D structure

PDB id

9GFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUG*UGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GFT_144 not in the Motif Atlas

Homologous match to IL_9DFE_010

Geometric discrepancy: 0.5524

The information below is about IL_9DFE_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87316.1

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

12

Unit IDs

9GFT|1|AV|G|289
9GFT|1|AV|U|290
9GFT|1|AV|G|291
*
9GFT|1|AV|U|349
9GFT|1|AV|G|350
9GFT|1|AV|C|351

Current chains

Chain AV

23S RNA

Nearby chains