3D structure

PDB id
9GFT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the HrpA-bound E. coli disome, Class I
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GUG*UGC
Length
6 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9GFT_144 not in the Motif Atlas
Homologous match to IL_9DFE_010
Geometric discrepancy: 0.5524
The information below is about IL_9DFE_010
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_85599.2
Basepair signature
cWW-tHS-cWW
Number of instances in this motif group
9

Unit IDs

9GFT|1|AV|G|289
9GFT|1|AV|U|290
9GFT|1|AV|G|291
*
9GFT|1|AV|U|349
9GFT|1|AV|G|350
9GFT|1|AV|C|351

Current chains

Chain AV
23S RNA

Nearby chains

No other chains within 10Å

Coloring options:


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