IL_9GFT_199
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACUAGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 9GFT|1|AV|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_199 not in the Motif Atlas
- Homologous match to IL_4WF9_065
- Geometric discrepancy: 0.1609
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
9GFT|1|AV|A|1669
9GFT|1|AV|C|1670
9GFT|1|AV|U|1671
9GFT|1|AV|A|1672
9GFT|1|AV|G|1673
9GFT|1|AV|G|1674
*
9GFT|1|AV|C|1990
9GFT|1|AV|U|1991
9GFT|1|AV|G|1992
9GFT|1|AV|U|1993
Current chains
- Chain AV
- 23S RNA
Nearby chains
- Chain AY
- 50S ribosomal protein L3
- Chain Af
- Large ribosomal subunit protein uL14
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