IL_9GFT_209
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAG*CGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_209 not in the Motif Atlas
- Homologous match to IL_5J7L_317
- Geometric discrepancy: 0.1986
- The information below is about IL_5J7L_317
- Detailed Annotation
- UAA/GAN related
- Broad Annotation
- No text annotation
- Motif group
- IL_77691.5
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
9GFT|1|AV|U|1864
9GFT|1|AV|U|1865
9GFT|1|AV|A|1866
9GFT|1|AV|G|1867
*
9GFT|1|AV|C|1874
9GFT|1|AV|G|1875
9GFT|1|AV|A|1876
9GFT|1|AV|A|1877
9GFT|1|AV|G|1878
Current chains
- Chain AV
- 23S RNA
Nearby chains
- Chain AK
- Large ribosomal subunit protein uL1
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