IL_9GFT_210

3D structure

PDB id

9GFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GC*GCAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GFT_210 not in the Motif Atlas

Geometric match to IL_8VTW_075

Geometric discrepancy: 0.1084

The information below is about IL_8VTW_075

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22551.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

9

Unit IDs

9GFT|1|AV|G|1933
9GFT|1|AV|C|1934
*
9GFT|1|AV|G|1964
9GFT|1|AV|C|1965
9GFT|1|AV|A|1966
9GFT|1|AV|C|1967

Current chains

Chain AV

23S RNA

Nearby chains

Chain AU

Transfer RNA; tRNA