IL_9GFT_216
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 9GFT|1|AV|G|2238
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_216 not in the Motif Atlas
- Homologous match to IL_5J7L_325
- Geometric discrepancy: 0.1317
- The information below is about IL_5J7L_325
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_85599.2
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
9GFT|1|AV|U|2081
9GFT|1|AV|A|2082
9GFT|1|AV|G|2083
*
9GFT|1|AV|U|2236
9GFT|1|AV|G|2237
9GFT|1|AV|G|2238
9GFT|1|AV|G|2239
Current chains
- Chain AV
- 23S RNA
Nearby chains
- Chain AX
- Large ribosomal subunit protein uL2
- Chain As
- Large ribosomal subunit protein bL28
Coloring options: