IL_9GFT_218
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_218 not in the Motif Atlas
- Geometric match to IL_6IA2_005
- Geometric discrepancy: 0.2261
- The information below is about IL_6IA2_005
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
9GFT|1|AV|C|2096
9GFT|1|AV|A|2097
9GFT|1|AV|U|2098
*
9GFT|1|AV|A|2191
9GFT|1|AV|U|2192
9GFT|1|AV|G|2193
Current chains
- Chain AV
- 23S RNA
Nearby chains
- Chain Ac
- Large ribosomal subunit protein bL9
Coloring options: