IL_9GFT_222

3D structure

PDB id

9GFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAG*CGACCUUGAAAUAC

Length

18 nucleotides

Bulged bases

9GFT|1|AV|A|2163, 9GFT|1|AV|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GFT|1|AV|G|2124
9GFT|1|AV|G|2125
9GFT|1|AV|A|2126
9GFT|1|AV|G|2127
*
9GFT|1|AV|C|2161
9GFT|1|AV|G|2162
9GFT|1|AV|A|2163
9GFT|1|AV|C|2164
9GFT|1|AV|C|2165
9GFT|1|AV|U|2166
9GFT|1|AV|U|2167
9GFT|1|AV|G|2168
9GFT|1|AV|A|2169
9GFT|1|AV|A|2170
9GFT|1|AV|A|2171
9GFT|1|AV|U|2172
9GFT|1|AV|A|2173
9GFT|1|AV|C|2174

Current chains

Chain AV

23S RNA

Nearby chains

Chain AK

Large ribosomal subunit protein uL1