3D structure

PDB id
9GFT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the HrpA-bound E. coli disome, Class I
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CUUUGAAGUG*CAUGGAG
Length
17 nucleotides
Bulged bases
9GFT|1|AV|U|2132
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9GFT|1|AV|C|2129
9GFT|1|AV|U|2130
9GFT|1|AV|U|2131
9GFT|1|AV|U|2132
9GFT|1|AV|G|2133
9GFT|1|AV|A|2134
9GFT|1|AV|A|2135
9GFT|1|AV|G|2136
9GFT|1|AV|U|2137
9GFT|1|AV|G|2138
*
9GFT|1|AV|C|2153
9GFT|1|AV|A|2154
9GFT|1|AV|U|2155
9GFT|1|AV|G|2156
9GFT|1|AV|G|2157
9GFT|1|AV|A|2158
9GFT|1|AV|G|2159

Current chains

Chain AV
23S RNA

Nearby chains

Chain AK
Large ribosomal subunit protein uL1

Coloring options:

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