IL_9GFT_264
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAG*UGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_264 not in the Motif Atlas
- Homologous match to IL_5J7L_256
- Geometric discrepancy: 0.1159
- The information below is about IL_5J7L_256
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
9GFT|1|N|G|536
9GFT|1|N|G|537
9GFT|1|N|A|538
9GFT|1|N|G|539
*
9GFT|1|N|U|554
9GFT|1|N|G|555
9GFT|1|N|A|556
9GFT|1|N|C|557
Current chains
- Chain N
- 23S RNA
Nearby chains
- Chain W
- Large ribosomal subunit protein uL13
- Chain d
- Large ribosomal subunit protein bL20
Coloring options: