IL_9GFT_315
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_315 not in the Motif Atlas
- Geometric match to IL_4WF9_117
- Geometric discrepancy: 0.1074
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22854.4
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
9GFT|1|N|G|1666
9GFT|1|N|G|1667
9GFT|1|N|A|1668
9GFT|1|N|A|1669
9GFT|1|N|C|1670
9GFT|1|N|U|1671
9GFT|1|N|A|1672
9GFT|1|N|G|1673
9GFT|1|N|G|1674
*
9GFT|1|N|C|1990
9GFT|1|N|U|1991
9GFT|1|N|G|1992
9GFT|1|N|U|1993
9GFT|1|N|C|1994
Current chains
- Chain N
- 23S RNA
Nearby chains
- Chain Q
- 50S ribosomal protein L3
- Chain X
- Large ribosomal subunit protein uL14
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