IL_9GFT_337

3D structure

PDB id

9GFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAUGUGUAGGAUAG*CCUUUA

Length

21 nucleotides

Bulged bases

9GFT|1|N|U|2111, 9GFT|1|N|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GFT|1|N|U|2106
9GFT|1|N|G|2107
9GFT|1|N|A|2108
9GFT|1|N|U|2109
9GFT|1|N|G|2110
9GFT|1|N|U|2111
9GFT|1|N|G|2112
9GFT|1|N|U|2113
9GFT|1|N|A|2114
9GFT|1|N|G|2115
9GFT|1|N|G|2116
9GFT|1|N|A|2117
9GFT|1|N|U|2118
9GFT|1|N|A|2119
9GFT|1|N|G|2120
*
9GFT|1|N|C|2178
9GFT|1|N|C|2179
9GFT|1|N|U|2180
9GFT|1|N|U|2181
9GFT|1|N|U|2182
9GFT|1|N|A|2183

Current chains

Chain N

23S RNA

Nearby chains

Chain C

Large ribosomal subunit protein uL1