IL_9GFT_339

3D structure

PDB id

9GFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCUUUGAAG*UGGAGC

Length

15 nucleotides

Bulged bases

9GFT|1|N|U|2131, 9GFT|1|N|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GFT|1|N|G|2128
9GFT|1|N|C|2129
9GFT|1|N|U|2130
9GFT|1|N|U|2131
9GFT|1|N|U|2132
9GFT|1|N|G|2133
9GFT|1|N|A|2134
9GFT|1|N|A|2135
9GFT|1|N|G|2136
*
9GFT|1|N|U|2155
9GFT|1|N|G|2156
9GFT|1|N|G|2157
9GFT|1|N|A|2158
9GFT|1|N|G|2159
9GFT|1|N|C|2160

Current chains

Chain N

23S RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain C

Large ribosomal subunit protein uL1