IL_9GFT_352
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 9GFT|1|N|A|2602
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_352 not in the Motif Atlas
- Homologous match to IL_5J7L_344
- Geometric discrepancy: 0.5811
- The information below is about IL_5J7L_344
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
9GFT|1|N|C|2591
9GFT|1|N|G|2592
*
9GFT|1|N|C|2601
9GFT|1|N|A|2602
9GFT|1|N|G|2603
Current chains
- Chain N
- 23S RNA
Nearby chains
- Chain A
- Transfer RNA; tRNA
- Chain M
- Transfer RNA; tRNA
- Chain P
- Large ribosomal subunit protein uL2
- Chain s
- VemP nascent chain
Coloring options: