IL_9GHA_138
3D structure
- PDB id
- 9GHA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.24 Å
Loop
- Sequence
- GC*GCAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHA_138 not in the Motif Atlas
- Geometric match to IL_5J7L_318
- Geometric discrepancy: 0.043
- The information below is about IL_5J7L_318
- Detailed Annotation
- Bulged stacked bases
- Broad Annotation
- Bulged stacked bases
- Motif group
- IL_22551.4
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 9
Unit IDs
9GHA|1|a|G|1933
9GHA|1|a|C|1934
*
9GHA|1|a|G|1964
9GHA|1|a|C|1965
9GHA|1|a|A|1966
9GHA|1|a|C|1967
Current chains
- Chain a
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: