IL_9GHB_056
3D structure
- PDB id
- 9GHB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 9GHB|1|A|C|1400, 9GHB|1|A|A|1503
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHB_056 not in the Motif Atlas
- Homologous match to IL_5J7L_058
- Geometric discrepancy: 0.0738
- The information below is about IL_5J7L_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9GHB|1|A|C|1399
9GHB|1|A|C|1400
9GHB|1|A|G|1401
*
9GHB|1|A|C|1501
9GHB|1|A|A|1502
9GHB|1|A|A|1503
9GHB|1|A|G|1504
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 9
- mRNA
- Chain E
- 30S ribosomal protein S5
- Chain W
- Elongation factor G
- Chain Z
- Transfer RNA; tRNA
Coloring options: