IL_9GHF_131
3D structure
- PDB id
- 9GHF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UGAGG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHF_131 not in the Motif Atlas
- Homologous match to IL_5J7L_310
- Geometric discrepancy: 0.1005
- The information below is about IL_5J7L_310
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_50730.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9GHF|1|a|U|1720
9GHF|1|a|G|1721
9GHF|1|a|A|1722
9GHF|1|a|G|1723
9GHF|1|a|G|1724
*
9GHF|1|a|U|1736
9GHF|1|a|G|1737
9GHF|1|a|G|1738
9GHF|1|a|A|1739
9GHF|1|a|G|1740
Current chains
- Chain a
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: