IL_9GHG_042
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- CCCAGACAA*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 9GHG|1|A|A|1090
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHG_042 not in the Motif Atlas
- Homologous match to IL_5J7L_284
- Geometric discrepancy: 0.2041
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9GHG|1|A|C|1087
9GHG|1|A|C|1088
9GHG|1|A|C|1089
9GHG|1|A|A|1090
9GHG|1|A|G|1091
9GHG|1|A|A|1092
9GHG|1|A|C|1093
9GHG|1|A|A|1094
9GHG|1|A|A|1095
*
9GHG|1|A|U|1152
9GHG|1|A|C|1153
9GHG|1|A|G|1154
9GHG|1|A|A|1155
9GHG|1|A|G|1156
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L6
Coloring options: