IL_9GHG_149
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- GGAGUACG*UGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHG_149 not in the Motif Atlas
- Homologous match to IL_4LFB_034
- Geometric discrepancy: 0.0645
- The information below is about IL_4LFB_034
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_84044.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
9GHG|1|a|G|896
9GHG|1|a|G|897
9GHG|1|a|A|898
9GHG|1|a|G|899
9GHG|1|a|U|900
9GHG|1|a|A|901
9GHG|1|a|C|902
9GHG|1|a|G|903
*
9GHG|1|a|U|914
9GHG|1|a|G|915
9GHG|1|a|A|916
9GHG|1|a|A|917
9GHG|1|a|A|918
9GHG|1|a|C|919
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain m
- 30S ribosomal protein S12
Coloring options: