IL_9GHG_152
3D structure
- PDB id
- 9GHG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases
- 9GHG|1|a|C|943
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHG_152 not in the Motif Atlas
- Homologous match to IL_5J7L_041
- Geometric discrepancy: 0.103
- The information below is about IL_5J7L_041
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.3
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
9GHG|1|a|G|942
9GHG|1|a|C|943
9GHG|1|a|A|944
*
9GHG|1|a|U|1390
9GHG|1|a|U|1391
9GHG|1|a|C|1392
9GHG|1|a|C|1393
9GHG|1|a|C|1394
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain F
- Transfer RNA; tRNA
- Chain h
- 30S ribosomal protein S7
- Chain j
- 30S ribosomal protein S9
Coloring options: