IL_9GHH_044

3D structure

PDB id

9GHH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

9GHH|1|A|A|1132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GHH_044 not in the Motif Atlas

Homologous match to IL_9DFE_043

Geometric discrepancy: 0.1997

The information below is about IL_9DFE_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GHH|1|A|G|1131
9GHH|1|A|A|1132
9GHH|1|A|G|1133
9GHH|1|A|U|1134
9GHH|1|A|G|1135
*
9GHH|1|A|C|1144
9GHH|1|A|U|1145
9GHH|1|A|C|1146

Current chains

Chain A

23S rRNA

Nearby chains

Chain 9

50S ribosomal protein L36