IL_9GHH_061

3D structure

PDB id

9GHH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UG*CGUUAAG

Length

9 nucleotides

Bulged bases

9GHH|1|A|U|1552

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GHH_061 not in the Motif Atlas

Homologous match to IL_9DFE_060

Geometric discrepancy: 0.3555

The information below is about IL_9DFE_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46086.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

1

Unit IDs

9GHH|1|A|U|1525
9GHH|1|A|G|1526
*
9GHH|1|A|C|1549
9GHH|1|A|G|1550
9GHH|1|A|U|1551
9GHH|1|A|U|1552
9GHH|1|A|A|1553
9GHH|1|A|A|1554
9GHH|1|A|G|1555

Current chains

Chain A

23S rRNA

Nearby chains