IL_9GHH_076
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AGGAG*CGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHH_076 not in the Motif Atlas
- Homologous match to IL_9DFE_075
- Geometric discrepancy: 0.0946
- The information below is about IL_9DFE_075
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_50730.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9GHH|1|A|A|1883
9GHH|1|A|G|1884
9GHH|1|A|G|1885
9GHH|1|A|A|1886
9GHH|1|A|G|1887
*
9GHH|1|A|C|1909
9GHH|1|A|G|1910
9GHH|1|A|A|1911
9GHH|1|A|A|1912
9GHH|1|A|U|1913
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
Coloring options: