IL_9GHH_101
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHH_101 not in the Motif Atlas
- Homologous match to IL_9DFE_102
- Geometric discrepancy: 0.1405
- The information below is about IL_9DFE_102
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.4
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9GHH|1|A|U|2679
9GHH|1|A|U|2680
9GHH|1|A|A|2681
9GHH|1|A|G|2682
9GHH|1|A|U|2683
9GHH|1|A|A|2684
9GHH|1|A|C|2685
*
9GHH|1|A|G|2690
9GHH|1|A|G|2691
9GHH|1|A|A|2692
9GHH|1|A|C|2693
9GHH|1|A|C|2694
9GHH|1|A|G|2695
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- Far1
- Chain K
- 50S ribosomal protein L6
Coloring options: