IL_9GHH_136
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 9GHH|1|a|A|580
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHH_136 not in the Motif Atlas
- Homologous match to IL_5J7L_026
- Geometric discrepancy: 0.0652
- The information below is about IL_5J7L_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
9GHH|1|a|C|577
9GHH|1|a|G|578
9GHH|1|a|U|579
9GHH|1|a|A|580
9GHH|1|a|A|581
9GHH|1|a|A|582
9GHH|1|a|G|583
*
9GHH|1|a|C|889
9GHH|1|a|G|890
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain f
- 30S ribosomal protein S5
- Chain m
- 30S ribosomal protein S12
- Chain r
- 30S ribosomal protein S17
Coloring options: