IL_9GHH_160
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHH_160 not in the Motif Atlas
- Homologous match to IL_5J7L_050
- Geometric discrepancy: 0.0842
- The information below is about IL_5J7L_050
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
9GHH|1|a|G|1072
9GHH|1|a|U|1073
9GHH|1|a|C|1074
*
9GHH|1|a|G|1203
9GHH|1|a|U|1204
9GHH|1|a|C|1205
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S3
- Chain f
- 30S ribosomal protein S5
- Chain k
- Small ribosomal subunit protein uS10
- Chain o
- 30S ribosomal protein S14 type Z
Coloring options: