IL_9GHH_163
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHH_163 not in the Motif Atlas
- Geometric match to IL_5J7L_053
- Geometric discrepancy: 0.105
- The information below is about IL_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42032.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
9GHH|1|a|C|1168
9GHH|1|a|U|1169
9GHH|1|a|G|1170
9GHH|1|a|C|1171
*
9GHH|1|a|G|1185
9GHH|1|a|A|1186
9GHH|1|a|G|1187
9GHH|1|a|G|1188
9GHH|1|a|A|1189
9GHH|1|a|A|1190
9GHH|1|a|G|1191
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S2
- Chain j
- 30S ribosomal protein S9
Coloring options: