IL_9GJ6_016
3D structure
- PDB id
- 9GJ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with NatA in proximal and distal position
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.91 Å
Loop
- Sequence
- CCUCGGAUAG*UGCGGAGUG
- Length
- 19 nucleotides
- Bulged bases
- 9GJ6|1|1|C|4757, 9GJ6|1|1|U|4758, 9GJ6|1|1|A|4764, 9GJ6|1|1|G|4870, 9GJ6|1|1|C|4871, 9GJ6|1|1|G|4873, 9GJ6|1|1|U|4876
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GJ6|1|1|C|4756
9GJ6|1|1|C|4757
9GJ6|1|1|U|4758
9GJ6|1|1|C|4759
9GJ6|1|1|G|4760
9GJ6|1|1|G|4761
9GJ6|1|1|A|4762
9GJ6|1|1|U|4763
9GJ6|1|1|A|4764
9GJ6|1|1|G|4765
*
9GJ6|1|1|U|4869
9GJ6|1|1|G|4870
9GJ6|1|1|C|4871
9GJ6|1|1|G|4872
9GJ6|1|1|G|4873
9GJ6|1|1|A|4874
9GJ6|1|1|G|4875
9GJ6|1|1|U|4876
9GJ6|1|1|G|4877
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain LE
- Large ribosomal subunit protein eL6
Coloring options: