IL_9GMO_008

3D structure

PDB id

9GMO (explore in PDB, NAKB, or RNA 3D Hub)

Description

eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

CGAAU*ACAUGUG

Length

12 nucleotides

Bulged bases

9GMO|1|A|G|119, 9GMO|1|A|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GMO|1|A|C|118
9GMO|1|A|G|119
9GMO|1|A|A|120
9GMO|1|A|A|121
9GMO|1|A|U|122
*
9GMO|1|A|A|147
9GMO|1|A|C|148
9GMO|1|A|A|149
9GMO|1|A|U|150
9GMO|1|A|G|151
9GMO|1|A|U|152
9GMO|1|A|G|153

Current chains

Chain A

28S rRNA

Nearby chains

Chain C

5.8S ribosomal RNA; 5.8S rRNA

Chain b

60S ribosomal protein L35

Chain l

60S ribosomal protein L15

Chain n

60S ribosomal protein L7a