IL_9GMO_031

3D structure

PDB id

9GMO (explore in PDB, NAKB, or RNA 3D Hub)

Description

eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

9GMO|1|A|A|932, 9GMO|1|A|C|934, 9GMO|1|A|A|935, 9GMO|1|A|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GMO|1|A|A|732
9GMO|1|A|A|733
9GMO|1|A|G|734
9GMO|1|A|G|735
*
9GMO|1|A|C|928
9GMO|1|A|A|929
9GMO|1|A|G|930
9GMO|1|A|C|931
9GMO|1|A|A|932
9GMO|1|A|G|933
9GMO|1|A|C|934
9GMO|1|A|A|935
9GMO|1|A|C|936
9GMO|1|A|U|937

Current chains

Chain A

28S rRNA

Nearby chains

Chain F

60S ribosomal protein L4

Chain M

60S ribosomal protein L18a

Chain s

60S ribosomal protein L14