IL_9GMO_031
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- AAGG*CAGCAGCACU
- Length
- 14 nucleotides
- Bulged bases
- 9GMO|1|A|A|932, 9GMO|1|A|C|934, 9GMO|1|A|A|935, 9GMO|1|A|C|936
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GMO_031 not in the Motif Atlas
- Homologous match to IL_8GLP_037
- Geometric discrepancy: 0.2576
- The information below is about IL_8GLP_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70469.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
9GMO|1|A|A|732
9GMO|1|A|A|733
9GMO|1|A|G|734
9GMO|1|A|G|735
*
9GMO|1|A|C|928
9GMO|1|A|A|929
9GMO|1|A|G|930
9GMO|1|A|C|931
9GMO|1|A|A|932
9GMO|1|A|G|933
9GMO|1|A|C|934
9GMO|1|A|A|935
9GMO|1|A|C|936
9GMO|1|A|U|937
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L4
- Chain M
- 60S ribosomal protein L18a
- Chain s
- 60S ribosomal protein L14
Coloring options: