IL_9GMO_063

3D structure

PDB id

9GMO (explore in PDB, NAKB, or RNA 3D Hub)

Description

eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GAUUAGA*UA(PSU)(PSU)CUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GMO|1|A|G|1745
9GMO|1|A|A|1746
9GMO|1|A|U|1747
9GMO|1|A|U|1748
9GMO|1|A|A|1749
9GMO|1|A|G|1750
9GMO|1|A|A|1751
*
9GMO|1|A|U|1779
9GMO|1|A|A|1780
9GMO|1|A|PSU|1781
9GMO|1|A|PSU|1782
9GMO|1|A|C|1783
9GMO|1|A|U|1784
9GMO|1|A|C|1785

Current chains

Chain A

28S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain G

60S ribosomal protein L5

Chain p

Large ribosomal subunit protein uL16