IL_9GMO_085
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- CGAUC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GMO_085 not in the Motif Atlas
- Homologous match to IL_8P9A_295
- Geometric discrepancy: 0.1957
- The information below is about IL_8P9A_295
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.1
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
9GMO|1|A|C|2589
9GMO|1|A|G|2590
9GMO|1|A|A|2591
9GMO|1|A|U|2592
9GMO|1|A|C|2593
*
9GMO|1|A|G|2752
9GMO|1|A|G|2753
9GMO|1|A|G|2754
9GMO|1|A|A|2755
9GMO|1|A|G|2756
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L8
- Chain T
- 60S ribosomal protein L27
- Chain a
- 60S ribosomal protein L34
Coloring options: