IL_9GMO_099

3D structure

PDB id

9GMO (explore in PDB, NAKB, or RNA 3D Hub)

Description

eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GG*CGAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GMO_099 not in the Motif Atlas

Homologous match to IL_8P9A_309

Geometric discrepancy: 0.1993

The information below is about IL_8P9A_309

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_18824.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

9GMO|1|A|G|2896
9GMO|1|A|G|2897
*
9GMO|1|A|C|3602
9GMO|1|A|G|3603
9GMO|1|A|A|3604
9GMO|1|A|C|3605

Current chains

Chain A

28S rRNA

Nearby chains

Chain L

60S ribosomal protein L19