IL_9GMO_114
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 9GMO|1|A|A|4203
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GMO_114 not in the Motif Atlas
- Homologous match to IL_8P9A_325
- Geometric discrepancy: 0.0607
- The information below is about IL_8P9A_325
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 134
Unit IDs
9GMO|1|A|G|4191
9GMO|1|A|A|4192
*
9GMO|1|A|U|4202
9GMO|1|A|A|4203
9GMO|1|A|C|4204
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain N
- 60S ribosomal protein L21
- Chain V
- 60S ribosomal protein L29
- Chain i
- 60S ribosomal protein L36a
- Chain p
- Large ribosomal subunit protein uL16
Coloring options: