IL_9GMO_118
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GACC*GC
- Length
- 6 nucleotides
- Bulged bases
- 9GMO|1|A|C|4349
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GMO_118 not in the Motif Atlas
- Geometric match to IL_5TBW_101
- Geometric discrepancy: 0.2332
- The information below is about IL_5TBW_101
- Detailed Annotation
- Single stack bend
- Broad Annotation
- Single stack bend
- Motif group
- IL_39137.1
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
9GMO|1|A|G|4347
9GMO|1|A|A|4348
9GMO|1|A|C|4349
9GMO|1|A|C|4350
*
9GMO|1|A|G|4364
9GMO|1|A|C|4365
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain K
- 60S ribosomal protein L18
- Chain U
- 60S ribosomal protein L27a
- Chain i
- 60S ribosomal protein L36a
- Chain r
- 60S ribosomal protein L13
Coloring options: