3D structure

PDB id
9GMO (explore in PDB, NAKB, or RNA 3D Hub)
Description
eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
Experimental method
ELECTRON MICROSCOPY
Resolution
2.59 Å

Loop

Sequence
GGC(PSU)UG*UGA(PSU)CC
Length
12 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9GMO|1|A|G|4400
9GMO|1|A|G|4401
9GMO|1|A|C|4402
9GMO|1|A|PSU|4403
9GMO|1|A|U|4404
9GMO|1|A|G|4405
*
9GMO|1|A|U|4439
9GMO|1|A|G|4440
9GMO|1|A|A|4441
9GMO|1|A|PSU|4442
9GMO|1|A|C|4443
9GMO|1|A|C|4444

Current chains

Chain A
28S rRNA

Nearby chains

Chain E
60S ribosomal protein L3
Chain V
60S ribosomal protein L29
Chain p
Large ribosomal subunit protein uL16

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1939 s