IL_9GMO_126

3D structure

PDB id

9GMO (explore in PDB, NAKB, or RNA 3D Hub)

Description

eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GMO|1|A|C|4466
9GMO|1|A|A|4467
9GMO|1|A|U|4468
9GMO|1|A|U|4469
9GMO|1|A|G|4470
*
9GMO|1|A|C|4485
9GMO|1|A|C|4486
9GMO|1|A|A|4487
9GMO|1|A|A|4488
9GMO|1|A|G|4489
9GMO|1|A|C|4490
9GMO|1|A|G|4491

Current chains

Chain A

28S rRNA

Nearby chains

Chain E

60S ribosomal protein L3

Chain I

60S ribosomal protein L13a

Chain P

60S ribosomal protein L23

Chain g

Ubiquitin-60S ribosomal protein L40

Chain o

60S ribosomal protein L9