IL_9GR1_105
3D structure
- PDB id
- 9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-TEC complex in delivery state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- CCCAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 9GR1|1|a|A|1048
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GR1_105 not in the Motif Atlas
- Homologous match to IL_5J7L_284
- Geometric discrepancy: 0.0992
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9GR1|1|a|C|1045
9GR1|1|a|C|1046
9GR1|1|a|C|1047
9GR1|1|a|A|1048
9GR1|1|a|G|1049
9GR1|1|a|A|1050
9GR1|1|a|C|1051
9GR1|1|a|A|1052
9GR1|1|a|G|1053
*
9GR1|1|a|U|1110
9GR1|1|a|C|1111
9GR1|1|a|G|1112
9GR1|1|a|A|1113
9GR1|1|a|G|1114
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain g
- 50S ribosomal protein L6
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