IL_9GUL_146

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UGUA(PSU)(OMG)*CGAAG

Length

11 nucleotides

Bulged bases

9GUL|1|L5|U|4634, 9GUL|1|L5|PSU|4636

QA status

Modified nucleotides: PSU, OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUL|1|L5|U|4632
9GUL|1|L5|G|4633
9GUL|1|L5|U|4634
9GUL|1|L5|A|4635
9GUL|1|L5|PSU|4636
9GUL|1|L5|OMG|4637
*
9GUL|1|L5|C|4662
9GUL|1|L5|G|4663
9GUL|1|L5|A|4664
9GUL|1|L5|A|4665
9GUL|1|L5|G|4666

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LW

60S ribosomal protein L24

Chain Ld

60S ribosomal protein L31