IL_9GUS_061

3D structure

PDB id

9GUS (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex TEC resolved (30S only)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGAG*UGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GUS_061 not in the Motif Atlas

Homologous match to IL_4LFB_060

Geometric discrepancy: 0.1768

The information below is about IL_4LFB_060

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.1

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

44

Unit IDs

9GUS|1|A|G|1416
9GUS|1|A|G|1417
9GUS|1|A|A|1418
9GUS|1|A|G|1419
*
9GUS|1|A|U|1481
9GUS|1|A|G|1482
9GUS|1|A|A|1483
9GUS|1|A|C|1484

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain M

30S ribosomal protein S12