IL_9GY4_020
3D structure
- PDB id
- 9GY4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AUUCAAC*GCGCAUUU
- Length
- 15 nucleotides
- Bulged bases
- 9GY4|1|5|U|467, 9GY4|1|5|U|687
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GY4|1|5|A|466
9GY4|1|5|U|467
9GY4|1|5|U|468
9GY4|1|5|C|469
9GY4|1|5|A|470
9GY4|1|5|A|471
9GY4|1|5|C|472
*
9GY4|1|5|G|682
9GY4|1|5|C|683
9GY4|1|5|G|684
9GY4|1|5|C|685
9GY4|1|5|A|686
9GY4|1|5|U|687
9GY4|1|5|U|688
9GY4|1|5|U|689
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain LE
- Large ribosomal subunit protein eL6
- Chain Lr
- 60S ribosomal protein L28
Coloring options: