IL_9GY4_155
3D structure
- PDB id
- 9GY4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUU*GUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 9GY4|1|5|G|5049
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GY4_155 not in the Motif Atlas
- Homologous match to IL_8P9A_359
- Geometric discrepancy: 0.1752
- The information below is about IL_8P9A_359
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_00086.1
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
9GY4|1|5|G|5000
9GY4|1|5|U|5001
9GY4|1|5|U|5002
*
9GY4|1|5|G|5045
9GY4|1|5|U|5046
9GY4|1|5|C|5047
9GY4|1|5|A|5048
9GY4|1|5|G|5049
9GY4|1|5|C|5050
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain Ld
- 60S ribosomal protein L31
Coloring options: