IL_8P9A_359

3D structure

PDB id

8P9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Methyllissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUA*UUAAGC

Length

9 nucleotides

Bulged bases

8P9A|1|AR|G|3377

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_43622.1

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

8P9A|1|AR|G|3328
8P9A|1|AR|U|3329
8P9A|1|AR|A|3330
*
8P9A|1|AR|U|3373
8P9A|1|AR|U|3374
8P9A|1|AR|A|3375
8P9A|1|AR|A|3376
8P9A|1|AR|G|3377
8P9A|1|AR|C|3378

Current chains

Chain AR

25S ribosomal RNA

Nearby chains

Chain CE

60S ribosomal protein L3

Chain CY

60S ribosomal protein L24-A

Chain DF

60S ribosomal protein L31-A