IL_9H3G_028

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

CAACG*CGUAAG

Length

11 nucleotides

Bulged bases

9H3G|1|A|A|694, 9H3G|1|A|U|711, 9H3G|1|A|A|712

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|A|C|692
9H3G|1|A|A|693
9H3G|1|A|A|694
9H3G|1|A|C|695
9H3G|1|A|G|696
*
9H3G|1|A|C|709
9H3G|1|A|G|710
9H3G|1|A|U|711
9H3G|1|A|A|712
9H3G|1|A|A|713
9H3G|1|A|G|714

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AG

Large ribosomal subunit protein eL13z

Chain BT

Large ribosomal subunit protein uL4z

Chain Ea

Large ribosomal subunit protein eL15z

Chain Ha

Large ribosomal subunit protein uL15x