IL_9H3G_054
3D structure
- PDB id
- 9H3G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.82 Å
Loop
- Sequence
- UUACG*CUAUA
- Length
- 10 nucleotides
- Bulged bases
- 9H3G|1|A|U|1341
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 25
Unit IDs
9H3G|1|A|U|1176
9H3G|1|A|U|1177
9H3G|1|A|A|1178
9H3G|1|A|C|1179
9H3G|1|A|G|1180
*
9H3G|1|A|C|1338
9H3G|1|A|U|1339
9H3G|1|A|A|1340
9H3G|1|A|U|1341
9H3G|1|A|A|1342
Current chains
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain AJ
- Large ribosomal subunit protein eL18x
- Chain AV
- Large ribosomal subunit protein eL32z
- Chain AW
- Large ribosomal subunit protein eL33y
- Chain BH
- Large ribosomal subunit protein uL13y
- Chain BR
- Ribosomal protein L30/L7 family protein
- Chain C3
- 5S ribosomal RNA; 5S rRNA
Coloring options: