IL_9H3G_092
3D structure
- PDB id
- 9H3G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.82 Å
Loop
- Sequence
- CGAUGG*UGCUAACG
- Length
- 14 nucleotides
- Bulged bases
- 9H3G|1|A|U|2158, 9H3G|1|A|C|2173, 9H3G|1|A|C|2177
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14684.2
- Basepair signature
- cWW-tWW-tWW-tSS-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
9H3G|1|A|C|2155
9H3G|1|A|G|2156
9H3G|1|A|A|2157
9H3G|1|A|U|2158
9H3G|1|A|G|2159
9H3G|1|A|G|2160
*
9H3G|1|A|U|2171
9H3G|1|A|G|2172
9H3G|1|A|C|2173
9H3G|1|A|U|2174
9H3G|1|A|A|2175
9H3G|1|A|A|2176
9H3G|1|A|C|2177
9H3G|1|A|G|2178
Current chains
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain BE
- Large ribosomal subunit protein eL43y
- Chain BQ
- Large ribosomal subunit protein uL2z
- Chain h1
- Small subunit ribosomal RNA; SSU rRNA
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