IL_9H3G_120

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

C(OMC)AAG*CGACG

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|A|C|2834
9H3G|1|A|OMC|2835
9H3G|1|A|A|2836
9H3G|1|A|A|2837
9H3G|1|A|G|2838
*
9H3G|1|A|C|2848
9H3G|1|A|G|2849
9H3G|1|A|A|2850
9H3G|1|A|C|2851
9H3G|1|A|G|2852

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain BJ

Large ribosomal subunit protein uL16y

Chain Ga

Ubiquitin-ribosomal protein eL40z fusion protein